Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015808219.1_cds_XP_016495232.1_9566
CDS Infomation

[gene=LOC107814338] [db_xref=GeneID:107814338] [protein=protein PLASTID TRANSCRIPTIONALLY ACTIVE 14-like isoform X2] [protein_id=XP_016495232.1] [location=join(3254..3322,3563..3775,4511..4648,5128..5253,5414..5542,6042..6131,6212..6362,9161..9270,10496..10567,11372..11477,11573..11770,12140..12182,12282..12360)] [gbkey=CDS]
Sequence

ATGGTATCTTCCACCATTTTAATTCAACAACCAACAAACTTGTTCCACCAGCCAGAGTTT
CACCATCAGTTGTGGAGACCTGGATATGCTGCACCGTTGCAAAAGCAACCCATTATTTTA
TGTAGTAGTAACAAGGGAAGAAGCAGACCCTTGAGAGTTACTGCAAGTGCTAATGGTGCT
GCTACTGCTTCCACTCTAGAGGGTCATGATTCTTCTCCAACGCCTTCTGCATTTCCTCTT
TTTACACCCCCTTCTCAACCCCAAGATACTCCTGCTGCTCAGCTGGAACTGGCAGATCCT
GATTTCTATAAAATAGGATATGTTAGAAGTTTTCGAGCCTACGGAATTGTATTCAGGGAG
GGACCGGATGGGTTTAGAGTGTTTGCTTCCAGAGACGTGGAGCCTCTCCGTCGAGCTAGG
GTAATAATGGAAATTCCTCTAGAACTGATGTTAACCATAAGCAAAAAGCTTCCTTGGATG
TTTTTTCCAGATATCATACCTGTGGGACATCCAATATTCGACATTATCAATTCAACTAAT
CCTGAGACAGATTCGGATCTGAGGTTGGCATGCCTTCTTTTATATGCTTTTGATTGCAAG
GACAACTTTTGGCAGCTTTATGGAGACTTCTTACCTAGTGATGATGAATGCACTAGCTTC
CTTCTAGCTACTGAGGAGGACCTTTTGGAGTTGCAAGACGAGAAGCTTGCTTCAACCATG
AGAGAACAGCAACATCGGGCACTTGAGTTTTGGGAGAAAAATTGGCATTCTGCAGTACCC
CTCAAAATAAAGCGTCTTGCTCGGGATCCTGAGAGATTTATTTGGGCAATGAGTATAGCA
CAATCTCGATGCATCAACTTGCAAATGAGAATTGGTGCACTGGTTCAAGATGCAAATTTG
TTGGTACCTTATGCTGACATGATGAATCATTCTTTCCAGCCAAACTGCTTTTTCCATTGG
CGCTTCAAGGACCGCATGCTGGAGGTGATGATAAATGCAGGACAAAGAATTAGAAAAGGA
GATGAGATGACTGTTGACTACATGGCTGGACAGAAGAATAACTTTTTCCTGCAGAGATAT
GGTTTTTCATCGCCTGTGAATCCTTGGGATGTCATTCATTTCACTGGAGAAGCCAAAATT
CATCTAGACACCTTCTTATCGGTCTTTAACATATCTGGCCTCCCTGGAGAATATTACCAC
AACAGTAGGCTATCGAATGATGGAGATAGTTTTGTTGATGGAGCAATCATAGCAGCAGCG
AGAACGTTACCTACTTGGTCAGATGGAGATCTCCCTCCAATTCCAAGTTTAGAGAGGAAA
GCAGTAAAGGAGCTGCAAGAAGAATGCCACCAGATGCTTGCAGAATTCCCCACAACTTCT
GACGAAGATCAGAAAATCCTAGATTCTATGCCGGACTGCAGGAGAACACTTGAAGCAGCA
ATAAAGTATAGGTTACATAGGAAATTACTGATAGAGAAGGTTATACAAGCATTGGACATT
TACCAAGATAGGATTCTGTTCTAG

Peptide Sequence

PEP ID

XP_016495232.1
PEP Infomation

PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 14-like isoform X2 [Nicotiana tabacum]
Sequence

MVSSTILIQQPTNLFHQPEFHHQLWRPGYAAPLQKQPIILCSSNKGRSRPLRVTASANGA
ATASTLEGHDSSPTPSAFPLFTPPSQPQDTPAAQLELADPDFYKIGYVRSFRAYGIVFRE
GPDGFRVFASRDVEPLRRARVIMEIPLELMLTISKKLPWMFFPDIIPVGHPIFDIINSTN
PETDSDLRLACLLLYAFDCKDNFWQLYGDFLPSDDECTSFLLATEEDLLELQDEKLASTM
REQQHRALEFWEKNWHSAVPLKIKRLARDPERFIWAMSIAQSRCINLQMRIGALVQDANL
LVPYADMMNHSFQPNCFFHWRFKDRMLEVMINAGQRIRKGDEMTVDYMAGQKNNFFLQRY
GFSSPVNPWDVIHFTGEAKIHLDTFLSVFNISGLPGEYYHNSRLSNDGDSFVDGAIIAAA
RTLPTWSDGDLPPIPSLERKAVKELQEECHQMLAEFPTTSDEDQKILDSMPDCRRTLEAA
IKYRLHRKLLIEKVIQALDIYQDRILF

Transcript Sequence

Gene sequence data has not been registered.